Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdhr3Q8BL00 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Mir686-201ENSMUST00000102174 109 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Gm14350-201ENSMUST00000116642 640 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Gm15371-201ENSMUST00000117057 784 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Gm5867-201ENSMUST00000063197 592 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Pck2-205ENSMUST00000226352 2784 ntBASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdhr3Q8BL00 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms