Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmbox1Q8BJA3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Gm29396-201ENSMUST00000185659 716 ntBASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Gm5161-201ENSMUST00000075243 853 ntBASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmbox1Q8BJA3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gm25668-201ENSMUST00000157700 129 ntBASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gm38223-201ENSMUST00000194484 695 ntBASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hmbox1Q8BJA3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms