Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gm11978-201ENSMUST00000122315 466 ntBASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gm5354-201ENSMUST00000182417 973 ntBASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf38Q8BI21 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Gm28631-201ENSMUST00000190740 334 ntBASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms