Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Slc5a7Q8BGY9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm28630-201ENSMUST00000187806 498 ntBASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm43125-201ENSMUST00000201724 730 ntBASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm10175-201ENSMUST00000086013 645 ntBASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc5a7Q8BGY9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Mir6990-201ENSMUST00000183724 91 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Gm27390-201ENSMUST00000184516 176 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Gm7063-201ENSMUST00000186840 981 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc5a7Q8BGY9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc5a7Q8BGY9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms