Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Gm26185-201ENSMUST00000157692 266 ntBASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm17208-201ENSMUST00000168388 535 ntBASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm7029-201ENSMUST00000173226 450 ntBASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm6266-201ENSMUST00000203844 806 ntBASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4bQ8BGE6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atg4bQ8BGE6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Atg4bQ8BGE6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.15□□□□□ -0.47
Atg4bQ8BGE6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atg4bQ8BGE6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4bQ8BGE6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms