Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm7851-201ENSMUST00000117574 323 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm12501-201ENSMUST00000119163 529 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm45550-201ENSMUST00000209380 946 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm270-201ENSMUST00000223010 976 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trnp1Q80ZI1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm22133-201ENSMUST00000102082 109 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm19994-201ENSMUST00000217086 586 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trnp1Q80ZI1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms