Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gm26461-201ENSMUST00000175064 290 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gm6458-201ENSMUST00000211573 635 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 Morn2-202ENSMUST00000227729 656 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Gm38359-201ENSMUST00000191884 2225 ntBASIC11.97□□□□□ -0.49
Pif1Q80SX8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Gm17208-201ENSMUST00000168388 535 ntBASIC11.97□□□□□ -0.49
Pif1Q80SX8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.97□□□□□ -0.49
Pif1Q80SX8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.97□□□□□ -0.49
Pif1Q80SX8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pif1Q80SX8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm10434-201ENSMUST00000101158 471 ntBASIC11.96□□□□□ -0.49
Pif1Q80SX8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm11222-201ENSMUST00000119005 738 ntBASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm24548-201ENSMUST00000158650 108 ntBASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm8738-201ENSMUST00000172606 329 ntBASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms