Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ctdp1Q7TSG2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ctdp1Q7TSG2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ctdp1Q7TSG2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctdp1Q7TSG2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdp1Q7TSG2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms