Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm44335-201ENSMUST00000196879 141 ntBASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm44297-201ENSMUST00000198304 141 ntBASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm44346-201ENSMUST00000198851 141 ntBASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm43514-201ENSMUST00000198852 424 ntBASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf220Q6PDX6 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm12428-201ENSMUST00000119844 727 ntBASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm24158-201ENSMUST00000175263 71 ntBASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms