Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm4Q6IRU2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Gm15376-201ENSMUST00000122258 783 ntBASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm4Q6IRU2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Gm12151-201ENSMUST00000121374 290 ntBASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm4Q6IRU2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm5354-201ENSMUST00000182417 973 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms