Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Zfp248Q640N4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Zfp248Q640N4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Zfp248Q640N4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Zfp248Q640N4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Zfp248Q640N4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Mir6392-201ENSMUST00000184924 108 ntBASIC9.82□□□□□ -0.84
Zfp248Q640N4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Zfp248Q640N4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.81□□□□□ -0.84
Zfp248Q640N4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Gm12859-201ENSMUST00000117834 427 ntBASIC9.81□□□□□ -0.84
Zfp248Q640N4 Gm5687-201ENSMUST00000118252 640 ntBASIC9.81□□□□□ -0.84
Zfp248Q640N4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Gm27437-201ENSMUST00000183429 107 ntBASIC9.81□□□□□ -0.84
Zfp248Q640N4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.81□□□□□ -0.84
Zfp248Q640N4 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.81□□□□□ -0.84
Zfp248Q640N4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Zfp248Q640N4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms