Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gm3436-201ENSMUST00000179930 840 ntBASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.34□□□□□ -0.91
Ndufa4Q62425 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.34□□□□□ -0.91
Ndufa4Q62425 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufa4Q62425 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Ndufa4Q62425 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Ndufa4Q62425 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm14494-201ENSMUST00000118786 435 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm27533-201ENSMUST00000183800 152 ntBASIC9.33□□□□□ -0.92
Ndufa4Q62425 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ndufa4Q62425 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms