Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm15573-201ENSMUST00000119487 540 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm23085-201ENSMUST00000157849 293 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm6905-201ENSMUST00000205729 511 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Scn9aQ62205 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.88□□□□□ -0.03
Scn9aQ62205 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.88□□□□□ -0.03
Scn9aQ62205 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn9aQ62205 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn9aQ62205 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn9aQ62205 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm13047-201ENSMUST00000117116 815 ntBASIC14.87□□□□□ -0.03
Scn9aQ62205 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn9aQ62205 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm3332-201ENSMUST00000189337 928 ntBASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm17831-201ENSMUST00000205579 900 ntBASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.87□□□□□ -0.03
Scn9aQ62205 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.87□□□□□ -0.03
Scn9aQ62205 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Scn9aQ62205 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.87□□□□□ -0.03
Scn9aQ62205 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.86□□□□□ -0.03
Scn9aQ62205 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.86□□□□□ -0.03
Scn9aQ62205 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Gm23596-201ENSMUST00000104304 132 ntBASIC14.86□□□□□ -0.03
Scn9aQ62205 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.86□□□□□ -0.03
Scn9aQ62205 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Gm10731-201ENSMUST00000181171 448 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms