Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.78□□□□□ -0.52
VcanQ62059 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Gm17877-201ENSMUST00000192578 814 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
VcanQ62059 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
VcanQ62059 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.78□□□□□ -0.52
VcanQ62059 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.78□□□□□ -0.52
VcanQ62059 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.78□□□□□ -0.52
VcanQ62059 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Gm9136-201ENSMUST00000193368 454 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Gm43962-201ENSMUST00000203898 190 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Gm45925-201ENSMUST00000218882 744 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
VcanQ62059 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.77□□□□□ -0.52
VcanQ62059 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
VcanQ62059 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
VcanQ62059 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VcanQ62059 Gm12030-201ENSMUST00000121917 223 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.77□□□□□ -0.53
VcanQ62059 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gm7719-201ENSMUST00000182374 975 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gm8531-201ENSMUST00000188319 893 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.77□□□□□ -0.53
VcanQ62059 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.77□□□□□ -0.53
VcanQ62059 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VcanQ62059 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Gm16305-201ENSMUST00000140747 556 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.77□□□□□ -0.53
VcanQ62059 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.77□□□□□ -0.53
VcanQ62059 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.77□□□□□ -0.53
VcanQ62059 Gm39404-201ENSMUST00000216350 313 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VcanQ62059 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.77□□□□□ -0.53
VcanQ62059 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VcanQ62059 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
VcanQ62059 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VcanQ62059 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm13916-201ENSMUST00000117368 628 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Gm7722-201ENSMUST00000120646 741 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Gm12196-201ENSMUST00000120954 262 ntBASIC11.76□□□□□ -0.53
VcanQ62059 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.76□□□□□ -0.53
VcanQ62059 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm22594-201ENSMUST00000104251 130 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Gm5257-201ENSMUST00000121823 790 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms