Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Gli3Q61602 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC16.91■□□□□ 0.3
Gli3Q61602 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Gm26134-201ENSMUST00000178484 110 ntBASIC16.91■□□□□ 0.3
Gli3Q61602 Gm45481-201ENSMUST00000209717 877 ntBASIC16.91■□□□□ 0.3
Gli3Q61602 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC16.91■□□□□ 0.3
Gli3Q61602 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.91■□□□□ 0.3
Gli3Q61602 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.91■□□□□ 0.3
Gli3Q61602 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC16.91■□□□□ 0.3
Gli3Q61602 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Gli3Q61602 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.91■□□□□ 0.3
Gli3Q61602 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Gm10169-201ENSMUST00000121822 348 ntBASIC16.9■□□□□ 0.3
Gli3Q61602 Gm3150-201ENSMUST00000166418 204 ntBASIC16.9■□□□□ 0.3
Gli3Q61602 Gm18776-201ENSMUST00000188833 654 ntBASIC16.9■□□□□ 0.3
Gli3Q61602 n-R5s185-201ENSMUST00000083953 119 ntBASIC16.9■□□□□ 0.3
Gli3Q61602 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gli3Q61602 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gli3Q61602 Gm10728-201ENSMUST00000194292 1829 ntBASIC16.9■□□□□ 0.3
Gli3Q61602 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.9■□□□□ 0.3
Gli3Q61602 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.9■□□□□ 0.3
Gli3Q61602 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.9■□□□□ 0.3
Gli3Q61602 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Gli3Q61602 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli3Q61602 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.89■□□□□ 0.3
Gli3Q61602 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC16.89■□□□□ 0.3
Gli3Q61602 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC16.89■□□□□ 0.3
Gli3Q61602 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gli3Q61602 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Gm43334-201ENSMUST00000197740 1318 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC16.89■□□□□ 0.29
Gli3Q61602 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC16.89■□□□□ 0.29
Gli3Q61602 Gm24248-201ENSMUST00000157321 322 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Gm17192-201ENSMUST00000169031 511 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC16.89■□□□□ 0.29
Gli3Q61602 Gm18304-201ENSMUST00000189162 546 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gli3Q61602 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.89■□□□□ 0.29
Gli3Q61602 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Gli3Q61602 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Gm12712-201ENSMUST00000120676 801 ntBASIC16.88■□□□□ 0.29
Gli3Q61602 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.88■□□□□ 0.29
Gli3Q61602 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms