Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Foxc1Q61572 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.71□□□□□ -0.85
Foxc1Q61572 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Foxc1Q61572 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Foxc1Q61572 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.85
Foxc1Q61572 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.71□□□□□ -0.85
Foxc1Q61572 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Foxc1Q61572 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm26464-201ENSMUST00000157094 305 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Foxc1Q61572 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm29036-201ENSMUST00000189967 877 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm6266-201ENSMUST00000203844 806 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm44237-201ENSMUST00000205183 936 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm4803-201ENSMUST00000218729 1279 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 AC115784.1-201ENSMUST00000227687 1010 ntBASIC9.71□□□□□ -0.86
Foxc1Q61572 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.71□□□□□ -0.86
Foxc1Q61572 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.71□□□□□ -0.86
Foxc1Q61572 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Foxc1Q61572 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm2420-202ENSMUST00000202224 2249 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm27701-201ENSMUST00000184498 110 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Mir7654-201ENSMUST00000185082 70 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm28911-201ENSMUST00000188837 117 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm44061-201ENSMUST00000203962 1195 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm43216-201ENSMUST00000196295 1333 ntBASIC9.7□□□□□ -0.86
Foxc1Q61572 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms