Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ecm1Q61508 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.19□□□□□ -0.14
Ecm1Q61508 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm14644-201ENSMUST00000116671 647 ntBASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm12266-201ENSMUST00000120311 962 ntBASIC14.19□□□□□ -0.14
Ecm1Q61508 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.19□□□□□ -0.14
Ecm1Q61508 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ecm1Q61508 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Gm18730-201ENSMUST00000218038 343 ntBASIC14.19□□□□□ -0.14
Ecm1Q61508 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.19□□□□□ -0.14
Ecm1Q61508 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.19□□□□□ -0.14
Ecm1Q61508 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.19□□□□□ -0.14
Ecm1Q61508 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.19□□□□□ -0.14
Ecm1Q61508 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ecm1Q61508 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.18□□□□□ -0.14
Ecm1Q61508 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.18□□□□□ -0.14
Ecm1Q61508 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.18□□□□□ -0.14
Ecm1Q61508 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.18□□□□□ -0.14
Ecm1Q61508 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms