Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm11425-201ENSMUST00000119608 498 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm24644-201ENSMUST00000157114 139 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm22331-201ENSMUST00000158066 136 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Vsx2Q61412 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm9396-201ENSMUST00000076703 567 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vsx2Q61412 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vsx2Q61412 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Vsx2Q61412 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Gm8213-201ENSMUST00000118191 441 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.58□□□□□ -0.4
Vsx2Q61412 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.58□□□□□ -0.4
Vsx2Q61412 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vsx2Q61412 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx2Q61412 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.57□□□□□ -0.4
Vsx2Q61412 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vsx2Q61412 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.57□□□□□ -0.4
Vsx2Q61412 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx2Q61412 Gm12203-201ENSMUST00000118235 598 ntBASIC12.57□□□□□ -0.4
Vsx2Q61412 Gm12209-201ENSMUST00000120089 596 ntBASIC12.57□□□□□ -0.4
Vsx2Q61412 Gm10156-201ENSMUST00000122364 462 ntBASIC12.57□□□□□ -0.4
Vsx2Q61412 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.57□□□□□ -0.4
Vsx2Q61412 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.57□□□□□ -0.4
Vsx2Q61412 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms