Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Gm8793-201ENSMUST00000183069 1303 ntBASIC13□□□□□ -0.33
Six4Q61321 Gm22018-201ENSMUST00000104357 131 ntBASIC13□□□□□ -0.33
Six4Q61321 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13□□□□□ -0.33
Six4Q61321 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Snora78-201ENSMUST00000158630 128 ntBASIC13□□□□□ -0.33
Six4Q61321 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13□□□□□ -0.33
Six4Q61321 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13□□□□□ -0.33
Six4Q61321 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13□□□□□ -0.33
Six4Q61321 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13□□□□□ -0.33
Six4Q61321 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 AC069562.3-201ENSMUST00000225387 587 ntBASIC13□□□□□ -0.33
Six4Q61321 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13□□□□□ -0.33
Six4Q61321 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.99□□□□□ -0.33
Six4Q61321 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Six4Q61321 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.99□□□□□ -0.33
Six4Q61321 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.99□□□□□ -0.33
Six4Q61321 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.99□□□□□ -0.33
Six4Q61321 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.99□□□□□ -0.33
Six4Q61321 Gm7809-201ENSMUST00000153199 742 ntBASIC12.99□□□□□ -0.33
Six4Q61321 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.99□□□□□ -0.33
Six4Q61321 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Six4Q61321 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Six4Q61321 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six4Q61321 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Six4Q61321 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Six4Q61321 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Six4Q61321 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.98□□□□□ -0.33
Six4Q61321 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.98□□□□□ -0.33
Six4Q61321 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Six4Q61321 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.98□□□□□ -0.33
Six4Q61321 AY702102-202ENSMUST00000194651 1173 ntBASIC12.98□□□□□ -0.33
Six4Q61321 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.98□□□□□ -0.33
Six4Q61321 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms