Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nr1h4Q60641 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm23935-201ENSMUST00000102303 57 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm24270-201ENSMUST00000102326 57 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm24245-201ENSMUST00000157318 57 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm27306-201ENSMUST00000183970 107 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm42550-201ENSMUST00000201553 960 ntBASIC12.31□□□□□ -0.44
Nr1h4Q60641 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nr1h4Q60641 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm15376-201ENSMUST00000122258 783 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm43575-201ENSMUST00000196420 516 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm20445-201ENSMUST00000061905 565 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.3□□□□□ -0.44
Nr1h4Q60641 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nr1h4Q60641 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Pck2-205ENSMUST00000226352 2784 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Gm6447-201ENSMUST00000118905 835 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms