Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav5d-4Q5R1F6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm13612-201ENSMUST00000119276 390 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm12138-201ENSMUST00000122180 951 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Gm7287-201ENSMUST00000205267 602 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.08□□□□□ -0.64
Trav5d-4Q5R1F6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gm8598-201ENSMUST00000221184 836 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms