Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm25911-201ENSMUST00000157621 56 ntBASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms