Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Gm44719-201ENSMUST00000206404 149 ntBASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm9385-201ENSMUST00000117563 472 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm15957-201ENSMUST00000118893 974 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm15483-201ENSMUST00000120338 456 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 AA619741-201ENSMUST00000195095 646 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3-3Q5R1C3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms