Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm11478-201ENSMUST00000117851 599 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm12203-201ENSMUST00000118235 598 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm12209-201ENSMUST00000120089 596 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm11637-201ENSMUST00000120601 592 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm2231-201ENSMUST00000125661 612 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm37497-201ENSMUST00000195830 798 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf20Q5DTM8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf20Q5DTM8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Gm13813-201ENSMUST00000120998 787 ntBASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms