Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim40Q3UWA4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim40Q3UWA4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim40Q3UWA4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim40Q3UWA4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim40Q3UWA4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm6736-201ENSMUST00000166583 948 ntBASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm3436-201ENSMUST00000179930 840 ntBASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim40Q3UWA4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim40Q3UWA4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trim40Q3UWA4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.08□□□□□ -0.47
Trim40Q3UWA4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms