Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm23255-201ENSMUST00000102244 110 ntBASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Spg11Q3UHA3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Mir744-201ENSMUST00000103261 100 ntBASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Gm24791-201ENSMUST00000104284 131 ntBASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Gm28882-201ENSMUST00000185504 314 ntBASIC11.77□□□□□ -0.52
Spg11Q3UHA3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Spg11Q3UHA3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Gm16305-201ENSMUST00000140747 556 ntBASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Gm29808-201ENSMUST00000194419 468 ntBASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.77□□□□□ -0.53
Spg11Q3UHA3 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Spg11Q3UHA3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms