Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm22133-201ENSMUST00000102082 109 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm25881-201ENSMUST00000157783 103 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm23153-201ENSMUST00000175323 313 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm8492-201ENSMUST00000182375 987 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm5733-201ENSMUST00000190232 939 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.1■□□□□ 0.01
Col5a2Q3U962 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gm23596-201ENSMUST00000104304 132 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Mir7076-201ENSMUST00000183519 74 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gm10774-201ENSMUST00000188689 204 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Snora73b-201ENSMUST00000083419 205 ntBASIC15.09■□□□□ 0.01
Col5a2Q3U962 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col5a2Q3U962 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Gm8199-201ENSMUST00000121323 823 ntBASIC15.08■□□□□ 0.01
Col5a2Q3U962 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.08■□□□□ 0.01
Col5a2Q3U962 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.08■□□□□ 0.01
Col5a2Q3U962 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Gm9996-201ENSMUST00000070359 913 ntBASIC15.08■□□□□ 0.01
Col5a2Q3U962 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Col5a2Q3U962 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col5a2Q3U962 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col5a2Q3U962 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col5a2Q3U962 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms