Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88bQ3TYP4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Gm24514-201ENSMUST00000174961 285 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Mir6927-201ENSMUST00000184494 71 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Gm5904-201ENSMUST00000210286 865 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Gm6458-201ENSMUST00000211573 635 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88bQ3TYP4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm11930-201ENSMUST00000117788 190 ntBASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm7857-201ENSMUST00000117957 358 ntBASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm43947-201ENSMUST00000203019 959 ntBASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88bQ3TYP4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms