Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm42612-201ENSMUST00000197986 623 ntBASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm43170-201ENSMUST00000199827 612 ntBASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fndc4Q3TR08 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11□□□□□ -0.65
Fndc4Q3TR08 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm15678-201ENSMUST00000117573 960 ntBASIC11□□□□□ -0.65
Fndc4Q3TR08 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Fndc4Q3TR08 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm5354-201ENSMUST00000182417 973 ntBASIC11□□□□□ -0.65
Fndc4Q3TR08 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm6218-201ENSMUST00000219812 628 ntBASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm5626-201ENSMUST00000222151 1058 ntBASIC11□□□□□ -0.65
Fndc4Q3TR08 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Fndc4Q3TR08 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Fndc4Q3TR08 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms