Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm16372-201ENSMUST00000073088 450 ntBASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm26035-201ENSMUST00000083065 308 ntBASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cul4aQ3TCH7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Gm14057-201ENSMUST00000120631 482 ntBASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Gm37917-201ENSMUST00000194711 392 ntBASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Cul4aQ3TCH7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Mir6392-201ENSMUST00000184924 108 ntBASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm8463-201ENSMUST00000208573 613 ntBASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.51□□□□□ -0.25
Cul4aQ3TCH7 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms