Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.56□□□□□ -0.72
Trim63Q38HM4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.56□□□□□ -0.72
Trim63Q38HM4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim63Q38HM4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.55□□□□□ -0.72
Trim63Q38HM4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gm12882-201ENSMUST00000121696 517 ntBASIC10.55□□□□□ -0.72
Trim63Q38HM4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gm35960-201ENSMUST00000202712 767 ntBASIC10.55□□□□□ -0.72
Trim63Q38HM4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms