Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mir339-201ENSMUST00000083659 96 ntBASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col19a1Q0VF58 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm20392-201ENSMUST00000173047 701 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Mir7076-201ENSMUST00000183519 74 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm42937-201ENSMUST00000197360 752 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm6867-201ENSMUST00000219165 425 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col19a1Q0VF58 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col19a1Q0VF58 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gm23596-201ENSMUST00000104304 132 ntBASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gm11246-201ENSMUST00000120880 345 ntBASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Mir7221-201ENSMUST00000184009 72 ntBASIC13.64□□□□□ -0.23
Col19a1Q0VF58 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Gm270-201ENSMUST00000223010 976 ntBASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col19a1Q0VF58 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col19a1Q0VF58 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms