Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.74□□□□□ -0.69
Tff1Q08423 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Tff1Q08423 Gm12341-201ENSMUST00000119724 503 ntBASIC10.74□□□□□ -0.69
Tff1Q08423 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.74□□□□□ -0.69
Tff1Q08423 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Tff1Q08423 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.74□□□□□ -0.69
Tff1Q08423 Gm27839-201ENSMUST00000184242 106 ntBASIC10.74□□□□□ -0.69
Tff1Q08423 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.74□□□□□ -0.69
Tff1Q08423 Gm45331-201ENSMUST00000209868 554 ntBASIC10.74□□□□□ -0.69
Tff1Q08423 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.74□□□□□ -0.69
Tff1Q08423 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Tff1Q08423 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Tff1Q08423 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Tff1Q08423 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Tff1Q08423 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Tff1Q08423 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tff1Q08423 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.73□□□□□ -0.69
Tff1Q08423 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.73□□□□□ -0.69
Tff1Q08423 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.73□□□□□ -0.69
Tff1Q08423 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.73□□□□□ -0.69
Tff1Q08423 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.73□□□□□ -0.69
Tff1Q08423 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Tff1Q08423 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tff1Q08423 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.72□□□□□ -0.69
Tff1Q08423 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Tff1Q08423 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.72□□□□□ -0.69
Tff1Q08423 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tff1Q08423 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms