Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.8□□□□□ -0.2
VcpQ01853 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.8□□□□□ -0.2
VcpQ01853 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.8□□□□□ -0.2
VcpQ01853 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
VcpQ01853 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.79□□□□□ -0.2
VcpQ01853 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.79□□□□□ -0.2
VcpQ01853 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.79□□□□□ -0.2
VcpQ01853 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.79□□□□□ -0.2
VcpQ01853 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Mir6979-201ENSMUST00000183927 56 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Mir7221-201ENSMUST00000184009 72 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VcpQ01853 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Gm26315-201ENSMUST00000083890 321 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.79□□□□□ -0.2
VcpQ01853 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VcpQ01853 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VcpQ01853 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcpQ01853 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VcpQ01853 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.78□□□□□ -0.2
VcpQ01853 Gm8213-201ENSMUST00000118191 441 ntBASIC13.78□□□□□ -0.2
VcpQ01853 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.78□□□□□ -0.2
VcpQ01853 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.78□□□□□ -0.2
VcpQ01853 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.78□□□□□ -0.2
VcpQ01853 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.78□□□□□ -0.2
VcpQ01853 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.78□□□□□ -0.2
VcpQ01853 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.78□□□□□ -0.2
VcpQ01853 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.78□□□□□ -0.2
VcpQ01853 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VcpQ01853 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.78□□□□□ -0.2
VcpQ01853 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
VcpQ01853 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
VcpQ01853 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
VcpQ01853 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcpQ01853 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.78□□□□□ -0.2
VcpQ01853 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
VcpQ01853 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
VcpQ01853 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcpQ01853 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VcpQ01853 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VcpQ01853 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VcpQ01853 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VcpQ01853 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VcpQ01853 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VcpQ01853 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.77□□□□□ -0.21
VcpQ01853 Gm14263-201ENSMUST00000117955 746 ntBASIC13.77□□□□□ -0.21
VcpQ01853 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms