Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trim43bP86448 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim43bP86448 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.29□□□□□ -0.28
Trim43bP86448 Gm26464-201ENSMUST00000157094 305 ntBASIC13.29□□□□□ -0.28
Trim43bP86448 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim43bP86448 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.29□□□□□ -0.28
Trim43bP86448 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Paupar-201ENSMUST00000194826 3482 ntBASIC13.29□□□□□ -0.28
Trim43bP86448 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim43bP86448 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trim43bP86448 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim43bP86448 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim43bP86448 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.28□□□□□ -0.28
Trim43bP86448 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim43bP86448 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trim43bP86448 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim43bP86448 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trim43bP86448 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim43bP86448 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.28□□□□□ -0.28
Trim43bP86448 Gm12485-201ENSMUST00000119641 291 ntBASIC13.28□□□□□ -0.28
Trim43bP86448 Mir1894-201ENSMUST00000122802 81 ntBASIC13.28□□□□□ -0.28
Trim43bP86448 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim43bP86448 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.28□□□□□ -0.28
Trim43bP86448 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim43bP86448 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim43bP86448 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim43bP86448 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43bP86448 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.28□□□□□ -0.28
Trim43bP86448 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trim43bP86448 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim43bP86448 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim43bP86448 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.27□□□□□ -0.28
Trim43bP86448 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43bP86448 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43bP86448 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim43bP86448 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Gm25927-201ENSMUST00000175058 117 ntBASIC13.27□□□□□ -0.29
Trim43bP86448 Gm27892-201ENSMUST00000185017 106 ntBASIC13.27□□□□□ -0.29
Trim43bP86448 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms