Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Gm24543-201ENSMUST00000103867 82 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SgcaP82350 Mir1897-201ENSMUST00000122581 272 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Gm18889-201ENSMUST00000174284 929 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Gm5264-201ENSMUST00000190584 848 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Gm19931-201ENSMUST00000198920 368 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SgcaP82350 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.82□□□□□ -0.68
SgcaP82350 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.81□□□□□ -0.68
SgcaP82350 Gm15393-201ENSMUST00000120499 219 ntBASIC10.81□□□□□ -0.68
SgcaP82350 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcaP82350 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcaP82350 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcaP82350 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcaP82350 Gm29541-201ENSMUST00000191351 678 ntBASIC10.81□□□□□ -0.68
SgcaP82350 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcaP82350 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcaP82350 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcaP82350 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.81□□□□□ -0.68
SgcaP82350 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcaP82350 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcaP82350 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcaP82350 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.8□□□□□ -0.68
SgcaP82350 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.8□□□□□ -0.68
SgcaP82350 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.8□□□□□ -0.68
SgcaP82350 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms