Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.84□□□□□ -0.35
Ldb1P70662 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.84□□□□□ -0.35
Ldb1P70662 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.84□□□□□ -0.35
Ldb1P70662 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.84□□□□□ -0.35
Ldb1P70662 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.84□□□□□ -0.35
Ldb1P70662 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.84□□□□□ -0.35
Ldb1P70662 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ldb1P70662 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ldb1P70662 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.84□□□□□ -0.35
Ldb1P70662 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Ldb1P70662 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.83□□□□□ -0.35
Ldb1P70662 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ldb1P70662 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ldb1P70662 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Ldb1P70662 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ldb1P70662 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ldb1P70662 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ldb1P70662 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ldb1P70662 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.83□□□□□ -0.36
Ldb1P70662 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.83□□□□□ -0.36
Ldb1P70662 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm22331-201ENSMUST00000158066 136 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Ldb1P70662 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm37922-201ENSMUST00000195596 455 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Gm17794-201ENSMUST00000220252 955 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.83□□□□□ -0.36
Ldb1P70662 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.83□□□□□ -0.36
Ldb1P70662 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.83□□□□□ -0.36
Ldb1P70662 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Ldb1P70662 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ldb1P70662 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.82□□□□□ -0.36
Ldb1P70662 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Ldb1P70662 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ldb1P70662 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm24196-201ENSMUST00000179161 110 ntBASIC12.82□□□□□ -0.36
Ldb1P70662 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.82□□□□□ -0.36
Ldb1P70662 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.82□□□□□ -0.36
Ldb1P70662 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ldb1P70662 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.82□□□□□ -0.36
Ldb1P70662 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms