Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.72□□□□□ -0.37
Shox2P70390 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.72□□□□□ -0.37
Shox2P70390 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Shox2P70390 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.72□□□□□ -0.37
Shox2P70390 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Psmb5-202ENSMUST00000227257 622 ntBASIC12.72□□□□□ -0.37
Shox2P70390 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.72□□□□□ -0.37
Shox2P70390 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.72□□□□□ -0.37
Shox2P70390 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shox2P70390 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shox2P70390 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Shox2P70390 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.71□□□□□ -0.37
Shox2P70390 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Shox2P70390 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.71□□□□□ -0.37
Shox2P70390 Gm12585-201ENSMUST00000117307 290 ntBASIC12.71□□□□□ -0.37
Shox2P70390 Mir1897-201ENSMUST00000122581 272 ntBASIC12.71□□□□□ -0.37
Shox2P70390 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.71□□□□□ -0.37
Shox2P70390 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Gm43514-201ENSMUST00000198852 424 ntBASIC12.71□□□□□ -0.37
Shox2P70390 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.71□□□□□ -0.37
Shox2P70390 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.71□□□□□ -0.37
Shox2P70390 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shox2P70390 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shox2P70390 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Shox2P70390 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shox2P70390 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.7□□□□□ -0.38
Shox2P70390 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms