Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smad1P70340 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smad1P70340 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smad1P70340 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smad1P70340 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smad1P70340 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smad1P70340 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smad1P70340 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smad1P70340 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smad1P70340 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Smad1P70340 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smad1P70340 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smad1P70340 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.31□□□□□ -0.28
Smad1P70340 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.31□□□□□ -0.28
Smad1P70340 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.31□□□□□ -0.28
Smad1P70340 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smad1P70340 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.31□□□□□ -0.28
Smad1P70340 Gm18041-201ENSMUST00000218210 618 ntBASIC13.31□□□□□ -0.28
Smad1P70340 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Smad1P70340 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smad1P70340 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.3□□□□□ -0.28
Smad1P70340 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.3□□□□□ -0.28
Smad1P70340 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.3□□□□□ -0.28
Smad1P70340 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.3□□□□□ -0.28
Smad1P70340 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smad1P70340 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.3□□□□□ -0.28
Smad1P70340 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.3□□□□□ -0.28
Smad1P70340 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Smad1P70340 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.3□□□□□ -0.28
Smad1P70340 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.3□□□□□ -0.28
Smad1P70340 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.3□□□□□ -0.28
Smad1P70340 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.3□□□□□ -0.28
Smad1P70340 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smad1P70340 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smad1P70340 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.3□□□□□ -0.28
Smad1P70340 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smad1P70340 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.29□□□□□ -0.28
Smad1P70340 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.29□□□□□ -0.28
Smad1P70340 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smad1P70340 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms