Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm8805-201ENSMUST00000117848 313 ntBASIC12.09□□□□□ -0.47
Six5P70178 Gm14921-201ENSMUST00000118643 908 ntBASIC12.09□□□□□ -0.47
Six5P70178 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Gm26927-201ENSMUST00000182385 965 ntBASIC12.09□□□□□ -0.47
Six5P70178 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Gm29127-201ENSMUST00000188304 517 ntBASIC12.09□□□□□ -0.47
Six5P70178 Gm37042-201ENSMUST00000193816 581 ntBASIC12.09□□□□□ -0.47
Six5P70178 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.09□□□□□ -0.47
Six5P70178 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.09□□□□□ -0.47
Six5P70178 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Six5P70178 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Six5P70178 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Six5P70178 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.08□□□□□ -0.48
Six5P70178 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.08□□□□□ -0.48
Six5P70178 Gm13369-201ENSMUST00000119442 987 ntBASIC12.08□□□□□ -0.48
Six5P70178 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.08□□□□□ -0.48
Six5P70178 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Six5P70178 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.08□□□□□ -0.48
Six5P70178 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.08□□□□□ -0.48
Six5P70178 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.08□□□□□ -0.48
Six5P70178 Gm8099-201ENSMUST00000200510 742 ntBASIC12.08□□□□□ -0.48
Six5P70178 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.08□□□□□ -0.48
Six5P70178 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.08□□□□□ -0.48
Six5P70178 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.08□□□□□ -0.48
Six5P70178 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Gm10146-201ENSMUST00000072739 309 ntBASIC12.08□□□□□ -0.48
Six5P70178 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Six5P70178 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.08□□□□□ -0.48
Six5P70178 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Six5P70178 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Six5P70178 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.08□□□□□ -0.48
Six5P70178 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.08□□□□□ -0.48
Six5P70178 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six5P70178 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six5P70178 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six5P70178 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.07□□□□□ -0.48
Six5P70178 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.07□□□□□ -0.48
Six5P70178 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six5P70178 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.07□□□□□ -0.48
Six5P70178 Gm26185-201ENSMUST00000157692 266 ntBASIC12.07□□□□□ -0.48
Six5P70178 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Gm5745-201ENSMUST00000183748 313 ntBASIC12.07□□□□□ -0.48
Six5P70178 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Six5P70178 Gm4768-201ENSMUST00000206199 686 ntBASIC12.07□□□□□ -0.48
Six5P70178 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.07□□□□□ -0.48
Six5P70178 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.07□□□□□ -0.48
Six5P70178 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six5P70178 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms