Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.08□□□□□ -0.32
ThraP63058 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.08□□□□□ -0.32
ThraP63058 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.08□□□□□ -0.32
ThraP63058 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.08□□□□□ -0.32
ThraP63058 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.08□□□□□ -0.32
ThraP63058 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.08□□□□□ -0.32
ThraP63058 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ThraP63058 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.08□□□□□ -0.32
ThraP63058 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.07□□□□□ -0.32
ThraP63058 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.07□□□□□ -0.32
ThraP63058 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Gm16177-201ENSMUST00000120728 718 ntBASIC13.07□□□□□ -0.32
ThraP63058 Gm10156-201ENSMUST00000122364 462 ntBASIC13.07□□□□□ -0.32
ThraP63058 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.07□□□□□ -0.32
ThraP63058 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Gm5370-201ENSMUST00000187187 574 ntBASIC13.07□□□□□ -0.32
ThraP63058 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Gm17330-201ENSMUST00000221047 165 ntBASIC13.07□□□□□ -0.32
ThraP63058 Itm2b-204ENSMUST00000228637 783 ntBASIC13.07□□□□□ -0.32
ThraP63058 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ThraP63058 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ThraP63058 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.07□□□□□ -0.32
ThraP63058 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.07□□□□□ -0.32
ThraP63058 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ThraP63058 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.07□□□□□ -0.32
ThraP63058 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gm23931-201ENSMUST00000103842 109 ntBASIC13.06□□□□□ -0.32
ThraP63058 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.06□□□□□ -0.32
ThraP63058 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.06□□□□□ -0.32
ThraP63058 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gm27514-201ENSMUST00000183692 110 ntBASIC13.06□□□□□ -0.32
ThraP63058 Gm27331-201ENSMUST00000183705 60 ntBASIC13.06□□□□□ -0.32
ThraP63058 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.06□□□□□ -0.32
ThraP63058 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ThraP63058 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.06□□□□□ -0.32
ThraP63058 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.06□□□□□ -0.32
ThraP63058 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.06□□□□□ -0.32
ThraP63058 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.06□□□□□ -0.32
ThraP63058 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ThraP63058 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.06□□□□□ -0.32
ThraP63058 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ThraP63058 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.06□□□□□ -0.32
ThraP63058 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ThraP63058 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ThraP63058 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms