Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.19□□□□□ -0.94
Rpl39P62892 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Rpl39P62892 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39P62892 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39P62892 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39P62892 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39P62892 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm4995-201ENSMUST00000117247 432 ntBASIC9.18□□□□□ -0.94
Rpl39P62892 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Rpl39P62892 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.18□□□□□ -0.94
Rpl39P62892 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39P62892 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm5264-201ENSMUST00000190584 848 ntBASIC9.18□□□□□ -0.94
Rpl39P62892 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm7774-201ENSMUST00000200064 533 ntBASIC9.18□□□□□ -0.94
Rpl39P62892 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.18□□□□□ -0.94
Rpl39P62892 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39P62892 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.18□□□□□ -0.94
Rpl39P62892 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.18□□□□□ -0.94
Rpl39P62892 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rpl39P62892 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39P62892 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rpl39P62892 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.17□□□□□ -0.94
Rpl39P62892 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
Rpl39P62892 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39P62892 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.17□□□□□ -0.94
Rpl39P62892 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.17□□□□□ -0.94
Rpl39P62892 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39P62892 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39P62892 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.17□□□□□ -0.94
Rpl39P62892 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39P62892 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms