Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.39□□□□□ -0.11
Tpm1P58771 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Tpm1P58771 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tpm1P58771 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpm1P58771 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.39□□□□□ -0.11
Tpm1P58771 Gm12485-201ENSMUST00000119641 291 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Gm43514-201ENSMUST00000198852 424 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpm1P58771 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tpm1P58771 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.39□□□□□ -0.11
Tpm1P58771 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tpm1P58771 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.39□□□□□ -0.11
Tpm1P58771 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm1P58771 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Tpm1P58771 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Tpm1P58771 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tpm1P58771 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpm1P58771 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpm1P58771 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.38□□□□□ -0.11
Tpm1P58771 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm1P58771 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.38□□□□□ -0.11
Tpm1P58771 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpm1P58771 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm1P58771 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms