Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Msh6P54276 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.25■□□□□ 0.19
Msh6P54276 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.24■□□□□ 0.19
Msh6P54276 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Msh6P54276 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Msh6P54276 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Msh6P54276 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.24■□□□□ 0.19
Msh6P54276 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.24■□□□□ 0.19
Msh6P54276 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.24■□□□□ 0.19
Msh6P54276 Gm44100-201ENSMUST00000204329 436 ntBASIC16.24■□□□□ 0.19
Msh6P54276 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.24■□□□□ 0.19
Msh6P54276 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Msh6P54276 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh6P54276 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Msh6P54276 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.23■□□□□ 0.19
Msh6P54276 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.23■□□□□ 0.19
Msh6P54276 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Msh6P54276 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh6P54276 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh6P54276 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.23■□□□□ 0.19
Msh6P54276 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.23■□□□□ 0.19
Msh6P54276 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Msh6P54276 Gm8018-201ENSMUST00000173536 789 ntBASIC16.23■□□□□ 0.19
Msh6P54276 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.23■□□□□ 0.19
Msh6P54276 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.23■□□□□ 0.19
Msh6P54276 Gm18041-201ENSMUST00000218210 618 ntBASIC16.23■□□□□ 0.19
Msh6P54276 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh6P54276 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh6P54276 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Msh6P54276 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.22■□□□□ 0.19
Msh6P54276 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Msh6P54276 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Msh6P54276 Gm15782-201ENSMUST00000121073 445 ntBASIC16.22■□□□□ 0.19
Msh6P54276 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Mir1943-201ENSMUST00000158276 73 ntBASIC16.22■□□□□ 0.19
Msh6P54276 Mir7032-201ENSMUST00000185154 79 ntBASIC16.22■□□□□ 0.19
Msh6P54276 Gm7003-201ENSMUST00000195089 312 ntBASIC16.22■□□□□ 0.19
Msh6P54276 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms