Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox3P53784 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sox3P53784 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox3P53784 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Mir686-201ENSMUST00000102174 109 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Sox3P53784 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox3P53784 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox3P53784 AU022133-201ENSMUST00000200601 873 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Gm42550-201ENSMUST00000201553 960 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Gm21769-201ENSMUST00000211922 111 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.38□□□□□ -0.43
Sox3P53784 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.38□□□□□ -0.43
Sox3P53784 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox3P53784 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox3P53784 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox3P53784 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sox3P53784 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.37□□□□□ -0.43
Sox3P53784 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 B9d1os-201ENSMUST00000137010 674 ntBASIC12.37□□□□□ -0.43
Sox3P53784 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Sox3P53784 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Mir5120-201ENSMUST00000175020 78 ntBASIC12.37□□□□□ -0.43
Sox3P53784 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Sox3P53784 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.37□□□□□ -0.43
Sox3P53784 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sox3P53784 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.37□□□□□ -0.43
Sox3P53784 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.37□□□□□ -0.43
Sox3P53784 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sox3P53784 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox3P53784 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sox3P53784 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox3P53784 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox3P53784 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox3P53784 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox3P53784 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.36□□□□□ -0.43
Sox3P53784 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.36□□□□□ -0.43
Sox3P53784 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox3P53784 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox3P53784 Gm22334-201ENSMUST00000158070 133 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Gm16379-201ENSMUST00000161469 348 ntBASIC12.36□□□□□ -0.43
Sox3P53784 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox3P53784 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox3P53784 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms