Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.14□□□□□ -0.31
Sox1P53783 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.14□□□□□ -0.31
Sox1P53783 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox1P53783 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.14□□□□□ -0.31
Sox1P53783 Gm45120-201ENSMUST00000208880 408 ntBASIC13.14□□□□□ -0.31
Sox1P53783 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox1P53783 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox1P53783 Gm45925-201ENSMUST00000218882 744 ntBASIC13.14□□□□□ -0.31
Sox1P53783 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sox1P53783 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.14□□□□□ -0.31
Sox1P53783 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sox1P53783 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox1P53783 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox1P53783 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Sox1P53783 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox1P53783 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox1P53783 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox1P53783 Mir671-201ENSMUST00000102432 98 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Gm12501-201ENSMUST00000119163 529 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.13□□□□□ -0.31
Sox1P53783 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox1P53783 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sox1P53783 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox1P53783 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.13□□□□□ -0.31
Sox1P53783 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox1P53783 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox1P53783 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Mir1956-201ENSMUST00000157748 65 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Sox1P53783 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Gm43752-201ENSMUST00000198475 697 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Gm19187-201ENSMUST00000206781 892 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.12□□□□□ -0.31
Sox1P53783 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Sox1P53783 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox1P53783 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Sox1P53783 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Sox1P53783 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.11□□□□□ -0.31
Sox1P53783 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox1P53783 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms