Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Gm5939-201ENSMUST00000119613 2874 ntBASIC19.5■□□□□ 0.71
Cux1P53564 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cux1P53564 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Cux1P53564 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Cux1P53564 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cux1P53564 Gm17391-201ENSMUST00000171036 126 ntBASIC19.5■□□□□ 0.71
Cux1P53564 Gm18038-201ENSMUST00000197900 485 ntBASIC19.5■□□□□ 0.71
Cux1P53564 AC141438.2-201ENSMUST00000215068 271 ntBASIC19.5■□□□□ 0.71
Cux1P53564 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC19.5■□□□□ 0.71
Cux1P53564 AC135114.1-201ENSMUST00000228682 270 ntBASIC19.5■□□□□ 0.71
Cux1P53564 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Gm10176-201ENSMUST00000159707 2264 ntBASIC19.5■□□□□ 0.71
Cux1P53564 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cux1P53564 Gm30238-201ENSMUST00000195528 2603 ntBASIC19.5■□□□□ 0.71
Cux1P53564 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cux1P53564 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux1P53564 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cux1P53564 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC19.49■□□□□ 0.71
Cux1P53564 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cux1P53564 Gm11509-201ENSMUST00000117358 325 ntBASIC19.49■□□□□ 0.71
Cux1P53564 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC19.49■□□□□ 0.71
Cux1P53564 Gm19459-201ENSMUST00000176240 835 ntBASIC19.49■□□□□ 0.71
Cux1P53564 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC19.49■□□□□ 0.71
Cux1P53564 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cux1P53564 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cux1P53564 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cux1P53564 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Cux1P53564 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cux1P53564 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC19.48■□□□□ 0.71
Cux1P53564 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cux1P53564 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Cux1P53564 Gm12501-201ENSMUST00000119163 529 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Gm14760-201ENSMUST00000121831 999 ntBASIC19.48■□□□□ 0.71
Cux1P53564 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Gm27438-201ENSMUST00000183480 110 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Gm28071-201ENSMUST00000190355 478 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Mir7686-201ENSMUST00000200604 57 ntBASIC19.48■□□□□ 0.71
Cux1P53564 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Gm21811-201ENSMUST00000096485 930 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Gm44851-201ENSMUST00000205735 2309 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cux1P53564 Gm43045-201ENSMUST00000198725 2095 ntBASIC19.48■□□□□ 0.71
Cux1P53564 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.47■□□□□ 0.71
Cux1P53564 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Gm22133-201ENSMUST00000102082 109 ntBASIC19.47■□□□□ 0.71
Cux1P53564 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Gm5638-201ENSMUST00000118618 1258 ntBASIC19.47■□□□□ 0.71
Cux1P53564 Gm8199-201ENSMUST00000121323 823 ntBASIC19.47■□□□□ 0.71
Cux1P53564 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Gm42682-201ENSMUST00000198349 1265 ntBASIC19.47■□□□□ 0.71
Cux1P53564 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Gm21998-201ENSMUST00000117552 1308 ntBASIC19.47■□□□□ 0.71
Cux1P53564 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cux1P53564 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cux1P53564 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cux1P53564 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cux1P53564 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Cux1P53564 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cux1P53564 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC19.46■□□□□ 0.71
Cux1P53564 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cux1P53564 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC19.46■□□□□ 0.71
Cux1P53564 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC19.46■□□□□ 0.71
Cux1P53564 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cux1P53564 AC148324.1-201ENSMUST00000219034 4240 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms