Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.19□□□□□ -0.3
ClgnP52194 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Gm28911-201ENSMUST00000188837 117 ntBASIC13.19□□□□□ -0.3
ClgnP52194 Gm29608-201ENSMUST00000190444 463 ntBASIC13.19□□□□□ -0.3
ClgnP52194 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.19□□□□□ -0.3
ClgnP52194 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.19□□□□□ -0.3
ClgnP52194 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ClgnP52194 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ClgnP52194 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gm16372-201ENSMUST00000073088 450 ntBASIC13.19□□□□□ -0.3
ClgnP52194 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.19□□□□□ -0.3
ClgnP52194 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ClgnP52194 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ClgnP52194 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ClgnP52194 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.18□□□□□ -0.3
ClgnP52194 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Gm6152-201ENSMUST00000151704 340 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.18□□□□□ -0.3
ClgnP52194 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Gm2495-201ENSMUST00000191160 466 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Gm19931-201ENSMUST00000198920 368 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ClgnP52194 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.18□□□□□ -0.3
ClgnP52194 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.18□□□□□ -0.3
ClgnP52194 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.18□□□□□ -0.3
ClgnP52194 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClgnP52194 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ClgnP52194 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ClgnP52194 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
ClgnP52194 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.17□□□□□ -0.3
ClgnP52194 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClgnP52194 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ClgnP52194 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ClgnP52194 Gm8463-201ENSMUST00000208573 613 ntBASIC13.17□□□□□ -0.3
ClgnP52194 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms