Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm13616-201ENSMUST00000120600 222 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm3436-201ENSMUST00000179930 840 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm27680-201ENSMUST00000184192 160 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm18905-201ENSMUST00000205454 928 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm46209-201ENSMUST00000217912 553 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-1P50220 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.68□□□□□ -0.7
Nkx2-1P50220 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms