Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.41□□□□□ -0.42
Prox1P48437 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.41□□□□□ -0.42
Prox1P48437 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.41□□□□□ -0.42
Prox1P48437 Gm17330-201ENSMUST00000221047 165 ntBASIC12.41□□□□□ -0.42
Prox1P48437 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Prox1P48437 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.41□□□□□ -0.42
Prox1P48437 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.41□□□□□ -0.42
Prox1P48437 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prox1P48437 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.41□□□□□ -0.42
Prox1P48437 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Prox1P48437 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.4□□□□□ -0.42
Prox1P48437 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.4□□□□□ -0.42
Prox1P48437 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Prox1P48437 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Prox1P48437 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.4□□□□□ -0.42
Prox1P48437 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.4□□□□□ -0.42
Prox1P48437 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Prox1P48437 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.4□□□□□ -0.42
Prox1P48437 Gm17795-201ENSMUST00000214505 757 ntBASIC12.4□□□□□ -0.42
Prox1P48437 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.4□□□□□ -0.42
Prox1P48437 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Prox1P48437 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.4□□□□□ -0.42
Prox1P48437 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.4□□□□□ -0.42
Prox1P48437 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Prox1P48437 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.4□□□□□ -0.42
Prox1P48437 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.4□□□□□ -0.42
Prox1P48437 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prox1P48437 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Prox1P48437 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Prox1P48437 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.4□□□□□ -0.43
Prox1P48437 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Prox1P48437 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.39□□□□□ -0.43
Prox1P48437 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Prox1P48437 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Prox1P48437 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Prox1P48437 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Prox1P48437 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.39□□□□□ -0.43
Prox1P48437 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.39□□□□□ -0.43
Prox1P48437 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.39□□□□□ -0.43
Prox1P48437 Mir7221-201ENSMUST00000184009 72 ntBASIC12.39□□□□□ -0.43
Prox1P48437 Mir6977-201ENSMUST00000184960 64 ntBASIC12.39□□□□□ -0.43
Prox1P48437 Gm45841-201ENSMUST00000207700 164 ntBASIC12.39□□□□□ -0.43
Prox1P48437 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Prox1P48437 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Prox1P48437 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Prox1P48437 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Prox1P48437 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Prox1P48437 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Prox1P48437 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms